tl;dr If you want to skip the explanation and justification for why you might want separate bibliographies, you can skip down to the example section, or just go see some example files at GitHub. Why use separate bibliographies? In academic articles, it’s common to have a supplemental appendix with extra tables, figures, robustness checks, additional math, proofs, and other details.

Pandoc-flavored Markdown makes it really easy to cite and reference things. You can write something like this (assuming you use this references.bib BibTeX file): --- title: "Some title" bibliography: references.bib --- According to @Lovelace:1842, computers can calculate things.

My longstanding workflow for writing, citing, and PDF management When I started my first master’s degree program in 2008, I decided to stop using Word for all my academic writing and instead use plain text Markdown for everything. Markdown itself had been a thing for 4 years, and MultiMarkdown—a pandoc-like extension of Markdown that could handle BibTeX bibliographies—was brand new.