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OutreachyOpen Science
Published
Authors Anne-Marie Sharp, Victoria Poromon

Introduction To a beginner, open source can be one of the best pathways into a fulfilling tech career. It not only provides access to source codes but also connects you with a global community of people from diverse backgrounds and skill sets. Together, contributors share ideas, collaborate on projects, and continuously improve the software.

BioconductorBiological Sciences
Published
Author Laurah Ondari

{width=“70%; class=”zoomable”; height:200px;“} The European Bioconductor conference 2025 (EuroBioC2025) took place between September 17 and 19, 2025, and was hosted at the Barcelona Biomedical Research Park (PRBB) in Barcelona by the Department of Medicine and Life Sciences of Universitat Pompeu Fabra (MELIS-UPF)and the Barcelona Institute for Global Health (ISGlobal). The Catalan capital boasts a rich culture, a lively atmosphere, and a blend

BioconductorBiological Sciences
Published
Author Laurah Ondari

{width=“70%; class=”zoomable”; height:200px;“} The European Bioconductor conference 2025 (EuroBioC2025) took place between September 17 and 19, 2025, and was hosted at the Barcelona Biomedical Research Park (PRBB) in Barcelona by the Department of Medicine and Life Sciences of Universitat Pompeu Fabra (MELIS-UPF)and the Barcelona Institute for Global Health (ISGlobal). The Catalan capital boasts a rich culture, a lively atmosphere, and a blend

GPUCZIBiological Sciences
Published
Author Andres Wokaty

Introduction GPU acceleration enables faster and more scalable analysis workflows, especially for tasks like deep learning, image processing, and large-scale genomics, making Bioconductor more powerful for researchers working with complex data.

Bioconductor-evolutionOntologyBiocViewsEDAMEducationBiological Sciences
Published
Authors Vince Carey, Lori Kern

Introduction The EDAM ontology is used to provide conceptual organization of resources in major initiatives like ELIXIR bio.tools and Galaxy. Bioconductor’s methods and data are tagged using an ad hoc terminologic hierarchy called biocViews.

EventsBiological Sciences
Published
Author Lluís Revilla Sancho

Join us for an open developer forum exploring how R and Rust can work together in bioinformatics and Bioconductor development. Organised and hosted by Lluís Revilla (Bioconductor Community Advisory Board), this online session will discuss technical and practical aspects of using Rust alongside R - discussing extendr, Rust-based package development, and real-world use cases. Whether you’re Rust-curious or already experimenting, all are welcome.

Tech-notesBiological Sciences
Published
Author with contributions from the Bioconductor and ggplot2 developer communities Maria Doyle

Introduction A major update to ggplot2 (version 4.0.0) is expected around mid-to-late July 2025 . It brings a significant internal change, replacing most of the S3 backend with the newer S7 object system. While this improves long-term maintainability and extensibility, it may break Bioconductor packages that depend on ggplot2, especially those that customise how plots are built or styled.

EducationCollaborationsGalaxyBiological Sciences
Published
Authors Gretta Yagudayeva, Maria Doyle, Charlotte Soneson, Marcel Ramos Pérez, Robert Castelo

Introduction This blog post was written during CoFest (CollaborationFest) that took place after the 2025 Galaxy Bioconductor Community Conference, held this year at Cold Spring Harbor Laboratory in New York.