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Data driven blogging from the GigaScience editors
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BiologyHealthGenomeGenome AssemblyParasitesBiological Sciences
Published

In GigaScience , Benjamin Makepiece and his co-authors from Liverpool present genome assemblies of two trombidid mite species, the itch-inducing chigger mite and its more benign cousin, the velvet mite.  The bite of the chigger mite can transmit a life-threatening bacterial disease, scrub typhus.

Developing WorldOpen AccessPublishingAgricultureCropsBiological Sciences
Published

View towards the National Wine Centre of Australia (conference venue) from the Adelaide Botanic Garden Having just attended our first plant phenomics conference – it was great to learn how far the field has progressed and how rapidly it continues to progress with the advancement of new technologies for high-throughput phenotyping.

BiologyTechnologyGenomicsMetagenomicsNetworksBiological Sciences
Published

Navigating Pangenome’s Labyrinth In the two decades since the first genomes were sequenced, with the exponential growth of new and closely related genomes it has become increasingly difficult to visualise and compare their structure. Particularly with the large diversity and difference in genes within microbial genomes.

BiologyGenomeGenome AssemblyGenomicsBiological Sciences
Published

Photo: UNSW Sydney The cane toad Rhinella marina is native to Central and South America. But thanks to humans and the sugar cane trade, the species now thrives also in Australia and other places where it doesn’t belong. The invasive species comes with an unpleasant surprise for native Australian predators, such as snakes or freshwater crocodiles: R. marina kills them with its toxic secretions.

BiologyOpen AccessPublishingTechnologyBig DataBiological Sciences
Published

With the upcoming 5th International Plant Phenotyping Symposium (IPPS) set to take place Oct 2-5, in Adelaide, Australia, we look at how the plant phenotyping community has progressed over the last decade and how we can potentially address the issues surrounding data sharing, re-use, and reproducible research. As we live in an increasingly data-driven era, the genomics community has, in particular, a long history of sharing data to

PublishingBioRxivOpen Peer ReviewOpen SciencePeer ReviewBiological Sciences
Published

Open Science Trek, The Next Integration Fostering and promoting more open and transparent science is one of the goals of GigaScience , and to do this we have been big promoters of open peer review as well as preprints servers. Combining both of these, Academic Karma was the one of the first platforms to focus on open review of preprints, and has helped facilitate this over the past 3 years.