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iPhylo

Rants, raves (and occasionally considered opinions) on phyloinformatics, taxonomy, and biodiversity informatics. For more ranty and less considered opinions, see my Twitter feed.ISSN 2051-8188. Written content on this site is licensed under a Creative Commons Attribution 4.0 International license.
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A little while ago I came across Wikisource, and it dawned on me that this is a model for BHL. To quote from the Wikisource web site: Much of their content comes from the Internet Archive (as does BHL's), and Wikisource have developed extensions for Mediaiwki to do some cool things, such as extract text and images from DjVu files.

Published

At the start of this week I took part in a biodiversity informatics workshop at the Naturhistoriska riksmuseets, organised by Kevin Holston. It was a fun experience, and Kevin was a great host, going out of his way to make sure myself and other contributors were looked after. I gave my usual pitch along the lines of "if you're not online you don't exist", and talked about iSpecies, identifiers, and wikis.

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Yes, I know this is ultimately a case of the "genius of and", but the more I play with the Semantic Mediawiki extension the more I think this is going to be the most productive way forward. I've had numerous conversations with Vince Smith about this. Vince and colleagues at the NHM have been doing a lot of work on "Scratchpads" -- Drupal based webs sites that tend to be taxon-focussed.

Published

Thinking more and more about using Mediawiki (or, more precisely, Semantic Mediawiki) as a platform for storing and querying information, rather than write my own tools completely from scratch. This means I need ways of modelling some relationships between identifiers and objects. The first is the relationship between document identifiers such as DOIs and metadata about the document itself.