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Jabberwocky Ecology

Jabberwocky Ecology
Ethan White and Morgan Ernest's blog for discussing issues and ideas related to ecology and academia.
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There is an excellent post on open science, prestige economies, and the social web over at Marciovm’s posterous*. For those of you who aren’t insanely nerdy** GitHub is… well… let’s just call it a very impressive collaborative tool for developing and sharing software***. But don’t worry, you don’t need to spend your days tied to a computer or have any interest in writing your own software to enjoy gems like: Thanks to Carl Boettiger

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Advertisements for three exciting postdoctoral positions came out in the last week. Interface between ecology, evolution and mathematics The first is with Hélène Morlon’s group in Paris. Hélène and I were postdocs in Jessica Green’s lab at the same time. She is both very smart and extremely nice, oh, and did I mention, her lab is in PARIS. Here’s the ad. If it’s a good fit then you couldn’t go wrong with this postdoc.

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An increasingly large number of folks doing research in ecology and other biological disciplines spend a substantial portion of their time writing computer programs to analyze data and simulate the outcomes of biological models. However, most ecologists have little formal training in software development¹. A recent survey suggests that we are not only;

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UPDATE: As of April 2012 Wiley has now changed their feeds to include the full list of authors. Thanks to Brady Allred for letting us know. An open letter to John Wiley & Sons Inc. Dear Wiley, I like a lot of things that you do, but a few months ago you quietly changed your RSS feeds in a way that is both disrespectful and frankly not good for your business.

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If you use R (and it seems like everybody does these days) then you should check out RStudio – an easy to install, cross-platform IDE for R. Basically it’s a seamless integration of all of the aspects of R (including scripts, the console, figures, help, etc.) into a single easy to use package. For those of you are familiar with Matlab, it’s a very similar interface. It’s not a full blown IDE yet (no debugger;