Chemical SciencesWordPress.com

Dr. Joaquin Barroso's Blog

Scientific log of a computational chemist - "Make like a molecule and React!"
Home PageAtom Feed
language
BloggingLatinXchemScienceTeachingTwitterChemical Sciences
Published

Once again, as the year before, I woke to my phone resembling a slot machine from any Vegas casino. #LatinXChem became a Trending Topic on Twitter early from it’s start on september 20th 2021, this year the Twitter poster session was divided into eleven categories (Ana, Bio, Comp, Edu, Eng, Env, Inorg, Mat, Nano, Org, Phys) with Nano and Comp being the ones with the most participants.

ChemistryComputational ChemistryCOVID-19Drug DeliveryHealthChemical Sciences
Published

The war against COVID-19 has been waged in many fronts. The computational chemistry community has done their share during this pandemic to put forward a cure, a vaccine, or a better understanding of the molecular mechanisms behind the human infection by the SARS-CoV-2 virus.

Computational ChemistryGaussianTheoretical ChemistryWhite PapersCompChemChemical Sciences
Published

Molecular Orbitals (MOs) are linear combinations of Atomic Orbitals (AOs), which in turn are linear combinations of other functions called ‘basis functions’. A basis, or more accurately a basis set, is a collection of functions which obey a set of rules (such as being orthogonal to each other and possibly being normalized) with which all AOs are constructed, and although these are centered on each atomic nucleus, the canonical way in which they

Computational ChemistryDFTFluorescenceGaussianNBOChemical Sciences
Published

I have written about extracting information from excited state calculations but an important consideration when analyzing the results is the proper use of the keyword density . This keyword let’s Gaussian know which density is to be used in calculating some results. An important property to be calculated when dealing with excited states is the change in dipole moment between the ground state and any given state.

ChemistryGreen ChemistryHistory Of ScienceResearchScienceChemical Sciences
Published

Prof. Mario Molina was awarded the Nobel Prize in Chemistry in 1995, the same year I started my chemistry education at the chemistry school from the National Autonomous University of Mexico, UNAM, the same school from where he got his undergraduate diploma. To be a chemistry student in the late nineties in Mexico had Prof.

Computational ChemistryDFTFluorescenceFMOGaussViewChemical Sciences
Published

This is a guest post by our very own Gustavo “ Gus ” Mondragón whose work centers around the study of excited states chemistry of photosynthetic pigments. When you’re calculating excited states (no matter the method you’re using, TD-DFT, CI-S(D), EOM-CCS(D)) the analysis of the orbital contributions to electronic transitions poses a challenge.

Computational ChemistryInternetSpectroscopyTheoretical ChemistryThermodynamicsChemical Sciences
Published

The Computational Chemistry Comparison and Benchmark DataBase (CCCBDB) from the National Institute of Standards and Technology (NIST) collects experimental and calculated thermochemistry—related values for 1968 common molecules, constituting a vast source of benchmarks for various kinds of calculations. In particular, scaling factors for vibrational frequencies are very useful when calculating vibrational spectra.