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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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Published
Author Konstantinos Vantas

That’s a lot alike Data Science, isn’t it? Hydrologic Processes evolve in space and time, are extremely complex and we may never comprehend them. For this reason Hydrologists use models where their inputs and outputs are measurable variables: climatic and hydrologic data, land uses, vegetation coverage, soil type etc.

Published
Author Daniel Münch

Olfactory Coding Detecting volatile chemicals and encoding these into neuronal activity is a vital task for all animals that is performed by their olfactory sensory systems. While these olfactory systems vary vastly between species regarding their numerical complexity, they are amazingly similar in their general structure.

Published
Author Jeroen Ooms

Earlier this month we released a new version of the tesseract package to CRAN. This package provides R bindings to Google’s open source optical character recognition (OCR) engine Tesseract. Two major new features are support for HOCR and support for the upcoming Tesseract 4. hOCR output Support for HOCR output was requested by one of our users on Github.

Published

The drake R package is a pipeline toolkit. It manages data science workflows, saves time, and adds more confidence to reproducibility. I hope it will impact the landscapes of reproducible research and high-performance computing, but I originally created it for different reasons. This post is the prequel to drake’s inception. There was struggle, and drake was the answer. Dissertation frustration My dissertation project was intense.

Published
Author Sam Albers

One of the best things about learning R is that no matter your skill level, there is always someone who can benefit from your experience. Topics in R ranging from complicated machine learning approaches to calculating a mean all find their relevant audiences. This is particularly true when writing R packages.

Published
Author Jeroen Ooms

This week magick 1.6 appeared on CRAN. This release is a big all-round maintenance update with lots of tweaks and improvements across the package. The NEWS file gives an overview of changes in this version. In this post we highlight some changes. library(magick)stopifnot(packageVersion('magick') >= 1.6) If you are new to magick, check out the vignette for a quick introduction.

Published
Author David Ranzolin

Introduction When I was in grad school at Emory, I had a favorite desk in the library. The desk wasn’t particularly cozy or private, but what it lacked in comfort it made up for in real estate. My books and I needed room to operate. Students of the ancient world require many tools, and when jumping between commentaries, lexicons, and interlinears, additional clutter is additional “friction”, i.e., lapses in thought due to frustration.