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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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The drake R package is a pipeline toolkit. It manages data science workflows, saves time, and adds more confidence to reproducibility. I hope it will impact the landscapes of reproducible research and high-performance computing, but I originally created it for different reasons. This post is the prequel to drake’s inception. There was struggle, and drake was the answer. Dissertation frustration My dissertation project was intense.

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Author Sam Albers

One of the best things about learning R is that no matter your skill level, there is always someone who can benefit from your experience. Topics in R ranging from complicated machine learning approaches to calculating a mean all find their relevant audiences. This is particularly true when writing R packages.

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Author Kelly O'Briant

[This interview occurred at the 2017 rOpenSci unconference] KO: What is your name, job title, and how long have you been using R? KR: My name is Karthik Ram I’m a research scientist at the University of California, Berkeley. I’m an ecologist by training but have been working in the ‘data science’ space for 15 years. My real introduction to R was during my PhD when I was a teaching assistant for an engineering class on data analysis.

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Join our Community Call on Tuesday, January 30th (January 31 for our Australian friends) Nick Golding, 2017 rOpenSci Fellow, will talk about two R packages he has developed recently. zoon aims to promote open and reproducible research in ecological modeling by helping researchers share their code in a modular way and produce reproducible research artifacts.

Published
Author Kelly O'Briant

KO: What is your name, your title, and how many years have you worked in R? JB: I’m Jenny Bryan, I am a software engineer at RStudio (still getting used to that title)., And I am on leave from being an Associate Professor at the University of British Columbia. I’ve been working with R or it’s predecessors since 1996. I switched to R from S in the early 2000s.

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I’ve raved about the value of extending a personalized welcome to new community members and I recently shared six tips for running a successful hackathon-flavoured unconference. Building on these, I’d like to share the specific approach and (free!) tools I used to help prepare new rOpenSci community members to be productive at our unconference.

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Authors Anikó B. Tóth, Nick Golding

Are you new to version control and always running into trouble with Git?Or are you a seasoned user, haunted by the traumas of learning Git and reliving them whilst trying to teach it to others?Yeah, us too. Git is a version control tool designed for software development, and it is extraordinarily powerful.

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Authors Holly Kirk, Di Cook, Alicia Allan, Ross Gayler, Roger Peng, Elle Saber

The second rOpenSci OzUnConf was held in Melbourne Australia a few weeks ago. A diverse range of scientists, developers and general good-eggs came together to make some R-magic happen and also learn a lot along the way. Before the conference began, a huge stack of projects were suggested on the unconf GitHub repo. For six data-visualisation enthusiasts, one issue in particular caught their eye, and the ochRe package was born.