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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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Published
Author David Ranzolin

Introduction When I was in grad school at Emory, I had a favorite desk in the library. The desk wasn’t particularly cozy or private, but what it lacked in comfort it made up for in real estate. My books and I needed room to operate. Students of the ancient world require many tools, and when jumping between commentaries, lexicons, and interlinears, additional clutter is additional “friction”, i.e., lapses in thought due to frustration.

Published

I’ve raved about the value of extending a personalized welcome to new community members and I recently shared six tips for running a successful hackathon-flavoured unconference. Building on these, I’d like to share the specific approach and (free!) tools I used to help prepare new rOpenSci community members to be productive at our unconference.

Published
Authors Maëlle Salmon, Noam Ross, Scott Chamberlain, Karthik Ram

rOpenSci is pleased to announce a new collaboration with the Methods in Ecology and Evolution (MEE), a journal of the British Ecological Society, published by Wiley press 1 . Publications destined for MEE that include the development of a scientific R package will now have the option of a joint review process whereby the R package is reviewed by rOpenSci, followed by fast-tracked review of the manuscript by MEE.

Published
Authors Anikó B. Tóth, Nick Golding

Are you new to version control and always running into trouble with Git?Or are you a seasoned user, haunted by the traumas of learning Git and reliving them whilst trying to teach it to others?Yeah, us too. Git is a version control tool designed for software development, and it is extraordinarily powerful.

Published
Authors Holly Kirk, Di Cook, Alicia Allan, Ross Gayler, Roger Peng, Elle Saber

The second rOpenSci OzUnConf was held in Melbourne Australia a few weeks ago. A diverse range of scientists, developers and general good-eggs came together to make some R-magic happen and also learn a lot along the way. Before the conference began, a huge stack of projects were suggested on the unconf GitHub repo. For six data-visualisation enthusiasts, one issue in particular caught their eye, and the ochRe package was born.

Published
Author Jonathan Carroll

This year’s rOpenSci ozunconf was held in Melbourne, bringing together over 45 R enthusiasts from around the country and beyond. As is customary, ideas for projects were discussed in GitHub Issues (41 of them by the time the unconf rolled around!) and there was no shortage of enthusiasm, interesting concepts, and varied experience.

Published
Author Kelly O'Briant

KO: What is your name, job title, and how long have you been using R? [Note: This interview took place in May 2017. Mara joined RStudio as their tidyverse developer advocate in November 2017.] MA: My name is Mara Averick, I do consulting, data science, I just say “data nerd at large” because I’ve seen those Venn diagrams and I’m definitely not a data scientist. I used R in high school for fantasy basketball.

Published
Author Scott Chamberlain

Nearly 4 years ago I wrote on this blog about an R package solr for working with the database Solr. Since then we’ve created a refresh of that package in the solrium package. Since solrium first hit CRAN about two years ago, users have raised a number of issues that required breaking changes. Thus, this blog post is about a major version bump in solrium. What is Solr?