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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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Open ScienceGovernanceSustainabilityROpenSci TeamPostdocComputer and Information Sciences
Published
Author Dan Sholler

A growing community of scientists from a variety of disciplines is moving the norms of scientific research toward open practices. Supporters of open science hope to increase the quality and efficiency of research by enabling the widespread sharing of datasets, research software source code, publications, and other processes and products of research.

CommunityHacktoberfestComputer and Information Sciences
Published

One of rOpenSci’s aims is to build capacity of software users and developers and foster a sense of pride in their work. What better way to do that than to encourage you to participate in Hacktoberfest, a month-long celebration of open source software! 🔗It doesn’t take much to get involved Beginners to experts. Contributors and package maintainers welcome.

CommunitySoftwareSoftware Peer ReviewRrricanesRrricanesdataComputer and Information Sciences
Published
Author Tim Trice

🔗What is rrricanes 🔗Why Write rrricanes? There is a tremendous amount of weather data available on the internet. Much of it is in raw format and not very easy to obtain. Hurricane data is no different. When one thinks of this data they may be inclined to think it is a bunch of map coordinates with some wind values and not much else. A deeper look will reveal structural and forecast data.

PatentsPatentsViewPackagesAPIUSPTOComputer and Information Sciences
Published
Author Chris Baker

🔗Why care about patents? 1. Patents play a critical role in incentivizing innovation, withoutwhich we wouldn’t have much of the technology we rely on everyday What does your iPhone, Google’s PageRank algorithm, and a buttersubstitute called Smart Balance all have in common? …They all probably wouldn’t be here if not for patents.

SoftwareSoftware Peer ReviewComputer and Information Sciences
Published
Authors Scott Chamberlain, Maëlle Salmon, Noam Ross, Karthik Ram

The R package ecosystem now contains more than 10K packages, and several flagship packages belong under the rOpenSci suite. Some of these are: magick for image manipulation, plotly for interactive plots, and git2r for interacting with git. rOpenSci is a community of people making software to facilitate open and reproducible science/research.

PackagesSoftwareExcelXlsxTech NotesComputer and Information Sciences
Published

We have started working on a new rOpenSci package called writexl. This package wraps the very powerful libxlsxwriter library which allows for exporting data to Microsoft Excel format. The major benefit of writexl over other packages is that it is completely written in C and has absolutely zero dependencies. No Java, Perl or Rtools are required. 🔗Getting Started The write_xlsx function writes a data frame to an xlsx file.

SoftwareSoftware Peer ReviewReviewerComputer and Information Sciences
Published
Author Verena Haunschmid

It all started January 26 th this year when I signed up to volunteer asa reviewer for R packages submitted to rOpenSci. My main motivation forwanting to volunteer was to learn something new and tocontribute to the R open source community. If you are wondering why thepeople behind rOpenSci are doing this, you can read How rOpenSci uses Code Review to Promote Reproducible Science.

PackagesSoftwareSpellingTextTech NotesComputer and Information Sciences
Published

The new rOpenSci spelling package provides utilities for spell checking common document formats including latex, markdown, manual pages, and DESCRIPTION files. It also includes tools especially for package authors to automate spell checking of R documentation and vignettes. 🔗Spell Checking Packages The main purpose of this package is to quickly find spelling errors in R packages.

SoftwareSoftware Peer ReviewCommunityComputer and Information Sciences
Published
Authors Noam Ross, Scott Chamberlain, Karthik Ram, Maëlle Salmon

At rOpenSci, we create and curate software to help scientists with the data life cycle. These tools access, download, manage, and archive scientific data in open, reproducible ways. Early on, we realized this could only be a community effort. The variety of scientific data and workflows could only be tackled by drawing on contributions of scientists with field-specific expertise. With the community approach came challenges.

CommunityCommunity CallEventsSoftware Peer ReviewComputer and Information Sciences
Published

Are you thinking about submitting a package to rOpenSci’s open peer software review? Considering volunteering to review for the first time? Maybe you’re an experienced package author or reviewer and have ideas about how we can improve. Join our Community Call on Wednesday, September 13th . We want to get your feedback and we’d love to answer your questions!