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Henry Rzepa's Blog

Henry Rzepa's Blog
Chemistry with a twist
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Interesting ChemistryPericyclicSolvolysisTutorial MaterialChemical Sciences
Published

There are many treasures in Woodward and Hoffmann’s (WH) classic monograph. One such is acetolysis of  the endo chloride (green), which is much much faster than that of the exo isomer (red). The explanation given in their article (p 805) confines itself to succinctly stating that only loss of the endo halogen can be concerted with a required disrotatory ring opening of the cyclopropane.

Chemical ITAdministratorAndroidAndroid Mobile Operating SystemBallChemical Sciences
Published

My very first post on this blog, in 2008, was to describe how Jmol could be used to illustrate chemical themes by adding 3D models to posts. Many of my subsequent efforts have indeed invoked Jmol. I thought I might review progress since then, with a particular focus on using the new generations of mobile device that have subsequently emerged.

Chemical IT13-olide3-dien-6Eudesma-1Semantic WebChemical Sciences
Published

Previously, I had noted that Corey reported in 1963/65 the total synthesis of the sesquiterpene dihydrocostunolide. Compound 16 , known as Eudesma-1,3-dien-6,13-olide was represented as shown below in black; the hydrogen shown in red was implicit in Corey’s representation, as was its stereochemistry. As of this instant, this compound is just one of 64,688,893 molecules recorded by Chemical Abstracts.

Interesting ChemistryElectrocyclicElias CoreyHistoricalPericyclicChemical Sciences
Published

My previous three posts set out my take on three principle categories of pericyclic reaction. Here I tell a prequel to the understanding of these reactions. In 1965, Woodward and Hoffmann[cite]10.1021/ja01080a054[/cite] in their theoretical analysis (submitted Nov 30, 1964) for which the Nobel prize (to Hoffmann only of the pair, Woodward having died) was later awarded.

AdamArchetypal CarrierConical IntersectionsElectrocyclicHistoricalChemical Sciences
Published

Woodward and Hoffmann published their milestone article  “Stereochemistry of Electrocyclic Reactions” in 1965. This brought maturity to the electronic theory of organic chemistry, arguably started by the proto-theory of Armstrong some 75 years earlier. Here, I take a modern look at the archetypal carrier of this insight, the ring opening of dimethylcyclobutene.

Interesting ChemistryAnimationNano CarChemical Sciences
Published

In the previous post, I wrote about the processes that might be involved in a molecular wheel rotating. A nano car has four wheels, and surely the most amazing thing is how the wheels manage to move in synchrony. This is one hell of a tough problem, and I do not attempt an answer here, but simply record an odd observation.

Interesting ChemistryConformational AnalysisNanocarChemical Sciences
Published

The world’s smallest nano car was recently driven a distance of 6nm along a copper track. When I saw this, I thought it might be interesting to go under the hood and try to explain what makes its engine tick and its fuel work. The molecule above represents (I think) the essentials of the engine. Its resting geometry in the S 0 electronic state is shown below. The resting geometry of the engine.